In that first hour video, it showed how it worked to a degree. You have a command visor that you use, and when you select it, you can point at certain spots, and the ship will fly over to you. Then you can enter it, and use other functions (read logs, save, etc). So, it pretty much acts like a travelling save spot. There could be other uses for the ship, but they didn't show it.
P.S. I couldn't help myself from watching the video :P.
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